PSI-RA: A parallel sparse index for read alignment on genomes.
M. Oguzhan KülekciWing-Kai HonRahul ShahJeffrey Scott VitterBojian XuPublished in: BIBM (2010)
Keyphrases
- phylogenetic analysis
- sequence alignment
- shared memory
- parallel processing
- index structure
- high dimensional
- sparse data
- parallel implementation
- sequence analysis
- topic maps
- database
- massively parallel
- sequence data
- image alignment
- sparse coding
- sparse representation
- computer architecture
- compressive sensing
- multi dimensional
- sparse matrix
- data sets