Specificity of Hybridization Between DNA Sequences Based on Free Energy.
Fumiaki TanakaAtsushi KamedaMasahito YamamotoAzuma OhuchiPublished in: DNA (2005)
Keyphrases
- free energy
- dna sequences
- dna computing
- belief propagation
- upper bound
- tandem repeats
- human genome
- competitive learning
- fixed point
- approximate inference
- coding regions
- posterior distribution
- binding sites
- rna sequences
- genomic sequences
- graphical models
- data mining
- motif discovery
- graph cuts
- transcription factors
- markov random field
- transcription factor binding sites
- parameter estimation
- sequence patterns
- information theoretic
- energy minimization