Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly.
Giulia GuidiGabriel RauletDaniel RokhsarLeonid OlikerKatherine A. YelickAydin BuluçPublished in: CoRR (2022)
Keyphrases
- distributed memory
- shared memory
- human genome
- ibm sp
- parallel implementation
- data parallelism
- multiprocessor systems
- fine grain
- single processor
- scientific computing
- genomic sequences
- sequence data
- parallel architecture
- parallel processing
- parallel computers
- matrix multiplication
- parallel machines
- message passing
- data partitioning
- multithreading
- dna sequences
- parallel programming
- parallel computation
- multi processor
- parallel computing
- genome wide