Protein Function Annotation Based on Ortholog Clusters Extracted from Incomplete Genomes Using Combinatorial Optimization.
Akshay VashistCasimir A. KulikowskiIlya B. MuchnikPublished in: RECOMB (2006)
Keyphrases
- combinatorial optimization
- protein function
- protein functional
- protein sequences
- metaheuristic
- protein protein interactions
- gene ontology
- protein structure
- computational methods
- traveling salesman problem
- amino acids
- simulated annealing
- protein interaction networks
- computational tools
- gene expression profiles
- clustering algorithm
- optimization problems
- cluster analysis
- protein interaction
- protein structure prediction
- genetic algorithm
- computational biology
- microarray
- secondary structure
- graph theory
- neural network
- network analysis
- document clustering
- ant colony optimization
- genomic data
- search space
- functional modules
- data analysis
- objective function