Identification of transcription factors for drug-associated gene modules and biomedical implications.
Min XiongBin LiQiang ZhuYun-Xing WangHong-yu ZhangPublished in: Bioinform. (2014)
Keyphrases
- transcription factors
- biomedical literature
- gene expression
- microarray
- regulatory networks
- gene regulation
- dna binding
- text mining
- cis regulatory
- transcription factor binding sites
- biological processes
- binding sites
- gene regulatory
- saccharomyces cerevisiae
- gene expression data
- cell cycle
- differentially expressed genes
- signaling pathways
- gene sets
- functional modules
- gene expression profiles
- dna sequences
- high throughput
- protein protein interactions
- component analysis
- automatic extraction
- microarray data
- differentially expressed
- biological knowledge
- information extraction
- genome wide
- systems biology
- co occurrence
- computational biology
- high dimensionality
- transcriptional regulation
- semantic relationships
- machine learning
- differential expression
- microarray datasets
- biological networks
- molecular biology
- protein structure
- document clustering