Solving and analyzing side-chain positioning problems using linear and integer programming.
Carleton L. KingsfordBernard ChazelleMona SinghPublished in: Bioinform. (2005)
Keyphrases
- integer programming
- integer program
- convex quadratic programming
- inference problems
- set covering problem
- transportation problem
- cutting plane
- cutting plane algorithm
- set partitioning
- linear relaxation
- integer programming formulations
- np hard
- constraint programming
- lp relaxation
- set covering
- network flow
- valid inequalities
- optimization problems
- network design problem
- ai planning
- linear systems
- column generation
- combinatorial optimization
- np complete
- linear programming
- quadratic programming
- heuristic search
- nonlinear optimization problems