FPGA accelerator for protein secondary structure prediction based on the GOR algorithm.
Fei XiaYong DouGuo-Qing LeiYusong TanPublished in: BMC Bioinform. (2011)
Keyphrases
- learning algorithm
- parallel implementation
- cost function
- protein secondary structure prediction
- objective function
- computational complexity
- detection algorithm
- dynamic programming
- optimal solution
- preprocessing
- computational cost
- np hard
- hardware implementation
- optimization algorithm
- worst case
- k means
- similarity measure
- neural network
- high speed
- particle swarm optimization
- segmentation algorithm
- significant improvement
- matching algorithm
- evolutionary algorithm
- real world