Compression of next-generation sequencing reads aided by highly efficient de novo assembly
Daniel C. JonesWalter L. RuzzoXinxia PengMichael G. KatzePublished in: CoRR (2012)
Keyphrases
- highly efficient
- rna seq
- high throughput
- genomic sequences
- gray code
- compression algorithm
- low cost
- gene expression
- compression scheme
- compression ratio
- data compression
- image compression
- alternative splicing
- multithreading
- low complexity
- low latency
- genome wide
- high throughput sequencing
- upper bound
- reference genome
- sat solvers
- previously unknown
- lower bound
- microarray
- special case