Decoding Genetic Variations: Communications-Inspired Haplotype Assembly.
Zrinka PuljizHaris VikaloPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2016)
Keyphrases
- haplotype inference
- human genome
- entropy minimization
- branch and bound algorithm
- decoding algorithm
- answer set programming
- communication systems
- sequence data
- linkage disequilibrium
- genetic algorithm
- genome wide
- dna sequences
- communication networks
- np hard problems
- multiple access
- decoding process
- image quality
- lower bound
- objective function