Evolving Regular Expression-Based Sequence Classifiers for Protein Nuclear Localisation.
Amine HeddadMarkus BrameierRobert M. MacCallumPublished in: EvoWorkshops (2004)
Keyphrases
- regular expressions
- pattern matching
- finite automata
- sequence alignment
- sequence analysis
- semistructured data
- deterministic finite automata
- genomic sequences
- training data
- xml schema
- frequent sequences
- remote homology detection
- query language
- string matching
- query evaluation
- amino acids
- sequence databases
- matching algorithm
- protein sequences
- feature selection
- protein structure
- static analysis
- graph databases
- data sets
- data management
- search engine
- machine learning
- data mining
- databases