Compression of genomic sequencing reads via hash-based reordering: algorithm and analysis.
Shubham ChandakKedar TatwawadiTsachy WeissmanPublished in: Bioinform. (2018)
Keyphrases
- experimental evaluation
- learning algorithm
- times faster
- dynamic programming
- significant improvement
- np hard
- computational complexity
- high accuracy
- cost function
- objective function
- detection algorithm
- preprocessing
- image compression
- neural network
- data compression
- convergence rate
- recognition algorithm
- matching algorithm
- optimization algorithm
- expectation maximization
- worst case
- computational cost
- k means