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GPU-Optimized Hybrid Neighbor/Cell List Algorithm for Coarse-Grained MD Simulations of Protein and RNA Folding and Assembly.
Andrew J. Proctor
Cody A. Stevens
Samuel S. Cho
Published in:
BCB (2013)
Keyphrases
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coarse grained
fine grained
rna secondary structure prediction
dynamic programming
energy landscape
pairwise
machine learning
simulated annealing
high throughput
protein sequences