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Profile-Driven Banded Smith-Waterman acceleration for Short Read Alignment.

Konstantina KoliogeorgiDimitrios SoudrisSotirios Xydis
Published in: DAC (2023)
Keyphrases
  • smith waterman
  • sequence alignment
  • subsequence matching
  • biological sequences
  • sequence data
  • psi blast
  • reference genome
  • machine learning
  • high dimensional
  • dynamic programming
  • spatial relations
  • dynamic time warping