Reconstruction of 3D genome architecture via a two-stage algorithm.
Mark R. SegalHenrik BengtssonPublished in: BMC Bioinform. (2015)
Keyphrases
- dynamic programming
- detection algorithm
- times faster
- k means
- learning algorithm
- computational complexity
- cost function
- theoretical analysis
- discrete tomography
- hardware implementation
- convergence rate
- matching algorithm
- optimization algorithm
- expectation maximization
- high accuracy
- computational cost
- experimental evaluation
- preprocessing
- linear programming
- input data
- worst case
- management system
- image reconstruction
- objective function
- improved algorithm
- feature selection
- real time