OntoProtein: Protein Pretraining With Gene Ontology Embedding.
Ningyu ZhangZhen BiXiaozhuan LiangSiyuan ChengHaosen HongShumin DengJiazhang LianQiang ZhangHuajun ChenPublished in: CoRR (2022)
Keyphrases
- gene ontology
- protein function
- protein protein interactions
- protein interaction data
- protein interaction
- microarray
- gene products
- semantic similarity
- microarray expression data
- genomic data
- protein function prediction
- computational methods
- high throughput
- information theoretic
- protein complexes
- biological processes
- gene expression
- gene networks
- protein interaction networks
- signaling pathways
- high precision
- functional modules
- interaction networks
- biological data
- gene function
- network topology
- co occurrence
- gene sets
- protein sequences
- systems biology
- amino acids
- computational approaches
- structural properties
- network analysis
- mutual information