Robust sequence alignment using evolutionary rates coupled with an amino acid substitution matrix.
Andrew NdhlovuScott HazelhurstPierre M. DurandPublished in: BMC Bioinform. (2015)
Keyphrases
- sequence alignment
- amino acids
- protein sequences
- protein structure prediction
- pairwise
- multiple sequence alignment
- secondary structure
- dynamic programming
- binding sites
- protein structure
- genetic algorithm
- protein function
- multiple alignment
- psi blast
- computational biology
- protein folding
- phylogenetic analysis
- multiple sequence alignments
- physico chemical