Protein-ligand binding affinity prediction exploiting sequence constituent homology.
Abbi Abdel-RehimOghenejokpeme I. OrhoborHang LouHao NiRoss D. KingPublished in: Bioinform. (2023)
Keyphrases
- drug design
- sequence analysis
- amino acid sequences
- sequence alignment
- tertiary structure
- protein tertiary structure
- hiv protease
- protein structure prediction
- protein sequences
- pairwise
- protein secondary structure
- protein secondary structure prediction
- protein structure
- protein protein
- amino acids
- psi blast
- contact map
- multiple sequence alignments
- sequence similarity
- prediction accuracy
- mhc class ii
- subcellular localization
- sequence data
- transcription factor binding sites
- protein protein interactions
- secondary structure
- predicting protein
- binding sites
- virtual screening
- drug discovery
- dna binding
- computational biology
- protein function
- protein interaction
- sequence prediction
- contact maps
- protein chains
- molecular biology
- remote homology detection
- major histocompatibility complex
- experimentally determined
- genome sequences
- multiple sequence alignment
- digital images
- protein interaction data
- coarse grained