Genome-Wide Detection of Alternative Splicing in Expressed Sequences Using Partial Order Multiple Sequence Alignment Graphs.
Catherine S. GrassoBarmak ModrekYi XingChristopher J. LeePublished in: Pacific Symposium on Biocomputing (2004)
Keyphrases
- genome wide
- multiple sequence alignment
- partial order
- alternative splicing
- high throughput
- biological sequences
- human genome
- sequence data
- sequence alignment
- protein sequences
- total order
- biological data
- memory efficient
- secondary structure
- computational biology
- multiple alignment
- genetic algorithm
- sequential patterns
- phylogenetic trees
- pairwise
- low cost
- real time
- graph theoretic
- data acquisition
- microarray
- graph search
- graphical models
- multiple sequence alignments