Discrimination of regulatory DNA by SVM on the basis of over- and under-represented motifs.
Rene te BoekhorstIrina I. AbnizovaLorenz WernischPublished in: ESANN (2008)
Keyphrases
- dna sequences
- binding sites
- cis regulatory
- transcription factors
- support vector
- support vector machine svm
- feature selection
- biological sequences
- motif discovery
- dna binding
- feature vectors
- knn
- kernel function
- transcriptional regulation
- regulatory elements
- dna computing
- rna sequences
- support vector machine
- multi class
- tandem repeats
- feature extraction
- genome wide
- kernel methods
- image classification
- genome sequences
- training data