Parallelization of Protein Clustering Algorithm Using OpenMP.
Dhruv DharLakshana HegdeMahesh S. PatilSatyadhyan ChickerurPublished in: ICACDS (2) (2018)
Keyphrases
- clustering algorithm
- shared memory
- parallel execution
- distributed memory
- parallel programming
- amino acids
- parallel processing
- protein sequences
- parallel computing
- protein structure
- data clustering
- k means
- message passing
- protein folding
- coarse grained
- parallel algorithm
- protein function
- drug discovery
- parallel computation
- multi processor
- contact map
- parallel implementations
- protein structure prediction
- clustering method
- high performance computing
- subcellular localization
- fine grained
- molecular structures
- molecular dynamics
- data partitioning
- cluster centers
- document clustering
- protein protein interaction networks
- fuzzy c means
- mass spectra
- tandem mass spectra
- protein interaction data
- amino acid sequences
- multiple sequence alignment
- protein interaction
- parallel machines
- protein protein interactions
- fuzzy clustering
- hierarchical clustering
- similarity measure