Combining genome and mouse knockout expression data to highlight binding sites for the transcription factor HNF1alpha.
Christopher R. LockwoodTimothy M. FraylingPublished in: Silico Biol. (2003)
Keyphrases
- binding sites
- transcription factors
- sequence data
- dna sequences
- regulatory networks
- genome sequences
- dna binding
- gene expression
- transcriptional regulation
- cis regulatory
- regulatory elements
- human genome
- gene expression levels
- microarray
- component analysis
- motif discovery
- genome wide
- transcription factor binding sites
- biological sequences
- statistical significance
- gene regulation
- gene sets
- saccharomyces cerevisiae
- microarray data
- protein interaction
- biological processes
- gene ontology
- systems biology
- gene expression data
- co occurrence
- cell cycle
- text mining
- computational biology