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Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms.

Daniel I. SpeiserM. Sabrina PankeyAlexander K. ZaharoffBarbara A. BattelleHeather D. Bracken-GrissomJesse W. BreinholtSeth M. BybeeThomas W. CroninAnders GarmAnnie R. LindgrenNipam H. PatelMegan L. PorterMeredith E. ProtasAjna S. RiveraJeanne M. SerbKirk S. ZiglerKeith A. CrandallTodd H. Oakley
Published in: BMC Bioinform. (2014)
Keyphrases
  • computational model
  • high level
  • similarity measure
  • search algorithm
  • probabilistic model
  • neural network
  • bayesian networks
  • objective function
  • search space
  • mathematical model