A deeper look into transcription regulatory code by preferred pair distance templates for transcription factor binding sites.
Ivan V. KulakovskiyA. A. BelostotskyArtem S. KasianovNatalia G. EsipovaYulia A. MedvedevaI. A. EliseevaVsevolod J. MakeevPublished in: Bioinform. (2011)
Keyphrases
- structure learning
- transcription factor binding sites
- gene regulatory
- cis regulatory
- gene regulatory networks
- transcription factors
- gene regulation
- regulatory elements
- binding sites
- dna sequences
- gene expression
- component analysis
- dna binding
- sequence data
- pairwise
- microarray
- genome wide
- regulatory networks
- distance measure
- distance function
- highly correlated
- co occurrence
- information retrieval
- statistical significance
- text mining