Parallel Optimization of Relion: Performance Comparison based on Cluster for CPU/GPU and KNL.
Heng ZhouFuchuan NiLiang ZhaoFang ZhengPublished in: ICACS (2018)
Keyphrases
- graphics processing units
- parallel processing
- parallel computation
- general purpose
- parallel implementation
- parallel computing
- parallel programming
- gpu implementation
- real time
- optimization problems
- pc cluster
- graphics processors
- global optimization
- multi threaded
- cluster of workstations
- memory bandwidth
- compute unified device architecture
- multithreading
- graphics hardware
- clustering algorithm
- data clustering
- massively parallel
- heterogeneous computing
- combinatorial optimization
- parallel architectures
- parallel hardware
- optimization method
- cpu implementation
- parallel algorithm
- computer architecture
- optimization model
- floating point
- multi core processors
- shared memory
- constrained optimization
- hierarchical clustering
- cluster analysis
- data sets