PARALIGN: rapid and sensitive sequence similarity searches powered by parallel computing technology.
Per Eystein SæbøSten Morten AndersenJon MyrsethJon K. LaerdahlTorbjørn RognesPublished in: Nucleic Acids Res. (2005)
Keyphrases
- parallel computing
- similarity search
- massively parallel
- computing systems
- case study
- data partitioning
- shared memory
- similarity searching
- parallel computation
- distance function
- computer architecture
- similarity measure
- parallel programming
- metric space
- high performance computing
- processing units
- parallel execution
- data processing
- query processing
- high dimensional
- indexing techniques
- pattern recognition
- parallel computers
- general purpose
- parallel machines
- computer systems
- field programmable gate array