Protein-protein interaction prediction via Collective Matrix Factorization.
Qian XuEvan Wei XiangQiang YangPublished in: BIBM (2010)
Keyphrases
- matrix factorization
- protein protein interactions
- protein interaction
- predicting protein
- wet lab
- collaborative filtering
- low rank
- recommender systems
- computational methods
- functional modules
- missing data
- factorization methods
- nonnegative matrix factorization
- gene ontology
- negative matrix factorization
- high throughput
- factor analysis
- gene expression
- biological processes
- network topology
- protein interaction data
- high precision
- biological data
- multiple sequence alignments
- secondary structure
- biological networks
- network analysis
- genomic data
- computational approaches
- protein complexes
- protein protein interaction networks
- ppi networks
- data mining
- pairwise
- information retrieval