GapReduce: A Gap Filling Algorithm Based on Partitioned Read Sets.
Junwei LuoJianxin WangJuan ShangHuimin LuoMin LiFang-Xiang WuYi PanPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2020)
Keyphrases
- preprocessing
- detection algorithm
- high accuracy
- dynamic programming
- learning algorithm
- optimization algorithm
- recognition algorithm
- computational complexity
- selection algorithm
- np hard
- experimental evaluation
- improved algorithm
- probabilistic model
- times faster
- worst case
- cost function
- k means
- estimation algorithm
- computational cost
- optimal solution
- memory requirements
- single pass
- convergence rate
- data sets
- equal sized
- matching algorithm
- theoretical analysis
- expectation maximization
- linear programming
- simulated annealing
- scheduling problem
- search space
- decision trees
- genetic algorithm