Capturing alternative secondary structures of RNA by decomposition of base-pairing probabilities.
Taichi HagioShun SakurabaJunichi IwakiriRyota MoriKiyoshi AsaiPublished in: BMC Bioinform. (2018)
Keyphrases
- secondary structure
- rna sequences
- rna secondary structure prediction
- predicting protein
- rna secondary structures
- protein structure
- protein sequences
- computational methods
- structural features
- protein secondary structure
- amino acid sequences
- multiple alignment
- protein folding
- secondary structure of proteins
- multiple sequence alignment
- amino acids
- protein structure prediction
- probability distribution
- rna structures
- string kernels
- molecular biology
- conditional probabilities
- computational approaches
- dna sequences
- fixed point
- neural network