Extraction of Binding Sites in Proteins by Searching for Similar Local Molecular Surfaces.
Satoshi KoizumiKeisuke ImadaTomonobu OzakiTakenao OhkawaPublished in: PRIB (2008)
Keyphrases
- protein protein
- binding sites
- dna binding
- protein protein interactions
- interaction networks
- protein sequences
- computational methods
- gene expression
- protein function
- protein interaction
- transcription factors
- high throughput
- sequence data
- predicting protein
- dna sequences
- motif discovery
- biological sequences
- protein structure prediction
- amino acids
- biological processes
- protein families
- protein structure
- amino acid sequences
- computational biology
- cis regulatory
- automatic extraction
- mass spectrometry
- biological networks
- protein complexes
- information extraction
- coding regions
- transcriptional regulation
- computational approaches
- regulatory networks
- network topology
- gene ontology
- component analysis
- sequence alignment
- molecular biology