JAR3D Webserver: Scoring and aligning RNA loop sequences to known 3D motifs.
James RollCraig L. ZirbelBlake A. SweeneyAnton I. PetrovNeocles LeontisPublished in: Nucleic Acids Res. (2016)
Keyphrases
- rna sequences
- genome sequences
- nucleotide sequences
- dna sequences
- biological sequences
- structural motifs
- sequence data
- genomic sequences
- rna molecules
- protein sequences
- recurring patterns
- string kernels
- image registration
- rna secondary structure prediction
- motif discovery
- secondary structure
- genomic data
- sequence analysis
- human genome
- transcription factor binding sites
- multiple alignment
- cis regulatory
- temporal patterns
- rna secondary structures
- comparative analysis
- social networks
- sequential patterns
- molecular biology
- long sequences
- computational biology
- multiple sequence alignment