PROCAIN server for remote protein sequence similarity search.
Yong WangRuslan SadreyevNick V. GrishinPublished in: Bioinform. (2009)
Keyphrases
- similarity search
- protein sequences
- computational biology
- protein structure
- high dimensional
- amino acids
- similarity measure
- metric space
- distance function
- similarity searching
- secondary structure
- sequence databases
- high dimensional data
- knn
- indexing techniques
- structural motifs
- query processing
- protein structure prediction
- biological sequences
- efficient similarity search
- cross view
- hash functions
- protein folding
- database
- databases
- protein secondary structure
- experimentally determined
- similarity queries
- data structure
- approximate similarity search
- protein secondary structure prediction
- locality sensitive hashing
- r tree
- dimensionality reduction
- principal component analysis
- neural network
- data sets