Automatic generation of 3D motifs for classification of protein binding sites.
Jean-Christophe NebelPawel HerzykDavid R. GilbertPublished in: BMC Bioinform. (2007)
Keyphrases
- binding sites
- dna binding
- transcription factor binding sites
- protein protein
- sequence alignment
- dna sequences
- transcription factors
- motif discovery
- gene expression
- sequence data
- regulatory elements
- biological sequences
- regulatory networks
- protein interaction
- machine learning
- drosophila melanogaster
- statistical significance
- microarray
- feature selection
- genome wide
- genome sequences
- high throughput
- gene expression profiles
- predicting protein
- coding regions
- protein structure
- microarray data
- transcriptional regulation