: a method for construction and visualization of amino acid binding motifs and sequence profiles including sequence weighting, pseudo counts and two-sided representation of amino acid enrichment and depletion.
Martin Christen Frølund ThomsenMorten NielsenPublished in: Nucleic Acids Res. (2012)
Keyphrases
- amino acids
- psi blast
- protein sequences
- sequence alignment
- protein families
- secondary structure
- dynamic programming
- protein secondary structure prediction
- sequence analysis
- statistical significance
- tertiary structure
- high precision
- pairwise
- protein folding
- protein structure prediction
- data analysis
- similarity measure
- statistical methods
- statistically significant