Reconstructing genome trees of prokaryotes using overlapping genes.
Chih-Hsien ChengChung-Han YangHsien-Tai ChiuChin Lung LuPublished in: BMC Bioinform. (2010)
Keyphrases
- sequenced genomes
- escherichia coli
- comparative genomics
- evolutionary history
- coding regions
- genomic sequences
- genome scale
- genome sequences
- regulatory networks
- metabolic pathways
- gene expression
- microarray data
- dna sequences
- phylogenetic trees
- microarray technology
- gene trees
- decision trees
- human genome
- sequence data
- genome rearrangements
- gene expression data
- high throughput sequencing
- gene regulatory networks
- gene expression profiles
- transcriptional regulatory
- sequence similarity
- microarray expression data
- microarray
- cell cycle
- gene selection
- binding sites
- biological processes
- cis regulatory
- biological data
- saccharomyces cerevisiae
- protein coding regions
- gene ontology
- experimental conditions
- regulatory elements
- gene prediction
- gene expression levels
- gene sets
- sequence analysis
- dna microarray
- gene regulation