RNANetMotif: Identifying sequence-structure RNA network motifs in RNA-protein binding sites.
Hongli MaHan WenZhiyuan XueGuojun LiZhaolei ZhangPublished in: PLoS Comput. Biol. (2022)
Keyphrases
- genome sequences
- binding sites
- cis regulatory
- sequence data
- genomic sequences
- dna sequences
- rna secondary structures
- sequence alignment
- transcription factor binding sites
- dna binding
- genome wide
- protein sequences
- secondary structure
- human genome
- transcription factors
- rna sequences
- genomic data
- sequence similarity
- biological sequences
- influenza virus
- network motifs
- gene expression
- protein families
- regulatory elements
- regulatory networks
- protein protein interactions
- amino acids
- motif discovery
- statistical significance
- structural properties
- protein structure
- network structure
- social network analysis