PhyloGibbs: A Gibbs Sampling Motif Finder That Incorporates Phylogeny.
Rahul SiddharthanEric D. SiggiaErik van NimwegenPublished in: PLoS Comput. Biol. (2005)
Keyphrases
- gibbs sampling
- topic models
- markov chain
- approximate inference
- parameter estimation
- latent dirichlet allocation
- belief networks
- expectation maximization
- em algorithm
- markov chain monte carlo
- exact inference
- least squares
- variational methods
- graphical models
- probabilistic inference
- bayesian networks
- belief propagation
- maximum likelihood
- sampling methods
- dynamic bayesian networks
- distributed systems