PiNGO: a Cytoscape plugin to find candidate genes in biological networks.
Michael E. SmootKeiichiro OnoTrey IdekerSteven MaerePublished in: Bioinform. (2011)
Keyphrases
- biological networks
- candidate genes
- gene selection
- gene clusters
- gene expression
- microarray
- gene ontology
- biological data
- microarray data
- functional modules
- biological systems
- systems biology
- graph mining
- link prediction
- complex networks
- biologically meaningful
- network analysis
- community detection
- biological processes
- pattern mining
- protein protein interactions
- gene expression data
- protein protein interaction networks
- high throughput
- community structure
- gene expression profiles
- social network analysis
- structural properties
- gene regulatory networks
- data analysis
- random walk