Reproducing the manual annotation of multiple sequence alignments using a SVM classifier.
Christian BlouinScott PerryAllan LavellEdward SuskoAndrew J. RogerPublished in: Bioinform. (2009)
Keyphrases
- svm classifier
- manual annotation
- multiple sequence alignments
- protein sequences
- support vector machine
- fully automatic
- pairwise
- support vector machine svm
- automatic analysis
- semi automatic
- error prone
- automatic annotation
- manually annotated
- image classification
- support vector
- feature vectors
- multiple sequence alignment
- protein protein interactions
- automatic image annotation
- image annotation
- training set
- phylogenetic trees
- kernel function
- semi supervised
- computational biology
- multiple alignment
- ground truth
- high level
- machine learning
- feature extraction
- sequence alignment
- relation extraction
- similarity measure
- semantic annotation
- neural network
- pattern recognition
- object recognition
- feature set