Combining Hadoop and GPU to preprocess large Affymetrix microarray data.
Sufeng NiuGuangyu YangNilim SarmaPengfei XuanMelissa C. SmithPradip K. SrimaniFeng LuoPublished in: IEEE BigData (2014)
Keyphrases
- microarray data
- microarray
- gene expression
- gene selection
- meta analysis
- feature selection
- data sets
- gene expression data
- microarray data analysis
- high dimensional
- cluster analysis
- microarray gene expression data
- dna microarray
- differentially expressed genes
- biological data
- gene networks
- real time
- small number of samples
- microarray classification
- gene expression profiles
- microarray datasets
- high throughput
- biologically meaningful
- dna microarray data
- gene sets
- gene clusters
- feature extraction