LAMPA, LArge Multidomain Protein Annotator, and its application to RNA virus polyproteins.
Anastasia A. GulyaevaAndrey I SigorskihElena S. OcheredkoDmitry V. SamborskiyAlexander E. GorbalenyaPublished in: Bioinform. (2020)
Keyphrases
- secondary structure
- structural motifs
- nucleotide sequences
- protein sequences
- genome sequences
- rna secondary structures
- amino acids
- sequence analysis
- protein structure
- influenza virus
- protein structure prediction
- amino acid sequences
- molecular biology
- genomic sequences
- sequence data
- multiple alignment
- dna sequences
- protein folding
- genome wide
- virus detection
- multi domain
- contact map
- multiple sequence alignment
- subcellular localization
- protein protein interactions
- protein function
- drug discovery
- molecular dynamics
- cis regulatory
- rna secondary structure prediction
- semantic annotation
- rna sequences
- string kernels
- computer viruses
- computational methods
- dead end
- regulatory networks
- rna molecules
- edit distance