ASAP: Accelerated Short Read Alignment on Programmable Hardware (Abstract Only).
Subho S. BanerjeeMohamed El-HadedyJong Bin LimDaniel ChenZbigniew T. KalbarczykDeming ChenRavishankar K. IyerPublished in: FPGA (2017)
Keyphrases
- low cost
- digital signal processors
- single chip
- hardware and software
- real time
- general purpose
- hardware implementation
- higher level
- signal processor
- programmable logic
- dynamic time warping
- low power
- low level
- image alignment
- data sets
- procrustes analysis
- reference genome
- vlsi implementation
- neural network
- high end
- circuit design
- computing power
- sequence alignment
- massively parallel
- image processing
- personal computer
- similarity measure
- embedded systems
- computer systems
- high speed