Recognizing binding sites of poorly characterized RNA-binding proteins on circular RNAs using attention Siamese network.
Hehe WuXiaoyong PanYang YangHong-Bin ShenPublished in: Briefings Bioinform. (2021)
Keyphrases
- dna binding
- cis regulatory
- binding sites
- genome wide
- transcription factors
- human genome
- motif discovery
- gene expression
- transcription factor binding sites
- protein protein
- high throughput
- dna sequences
- gene regulation
- secondary structure
- protein sequences
- sequence data
- multiple alignment
- protein interaction
- biological processes
- expression profiles
- interaction networks
- sequence alignment
- protein structure
- statistical significance
- network model
- alternative splicing
- statistically significant
- rna secondary structures
- rna sequences
- genome sequences
- protein protein interaction networks
- functional modules
- protein protein interactions