TargetFinder: searching annotated sequence databases for target genes of transcription factors.
Giovanni LavorgnaAlessandro GuffantiG. BorsaniAndrea BallabioE. BoncinelliPublished in: Bioinform. (1999)
Keyphrases
- gene expression
- sequence databases
- sequence data
- regulatory elements
- transcription factors
- dna binding
- transcription factor binding sites
- regulatory networks
- binding sites
- microarray
- genome sequences
- gene expression data
- dna sequences
- sequence patterns
- microarray data
- saccharomyces cerevisiae
- sequence alignment
- biological data
- protein sequences
- genome wide
- signaling pathways
- component analysis
- biomedical literature
- sequential pattern mining
- computational biology
- systems biology
- search tools
- high throughput
- sequential patterns
- similarity search
- databases
- statistical analysis
- alternative splicing
- co occurrence
- information extraction