Helix: Algorithm/Architecture Co-design for Accelerating Nanopore Genome Base-calling.
Qian LouSarath Chandra JangaLei JiangPublished in: PACT (2020)
Keyphrases
- experimental evaluation
- k means
- dynamic programming
- computational cost
- improved algorithm
- optimal solution
- times faster
- probabilistic model
- expectation maximization
- objective function
- matching algorithm
- ant colony optimization
- high accuracy
- segmentation algorithm
- detection algorithm
- np hard
- classification algorithm
- cost function
- learning algorithm
- hardware architecture
- input image
- optimization algorithm
- path planning
- computational complexity
- recognition algorithm
- selection algorithm
- parallel architecture