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Fast and Simple Character Classes and Bounded Gaps Pattern Matching, with Applications to Protein Searching.
Gonzalo Navarro
Mathieu Raffinot
Published in:
J. Comput. Biol. (2003)
Keyphrases
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pattern matching
string matching
regular expressions
pattern matching algorithm
matching process
approximate pattern matching
tree matching
matching strategy
compressed text
boyer moore
search algorithm
protein structure
suffix tree
lossy compression