DSA: Scalable Distributed Sequence Alignment System Using SIMD Instructions.
Bo XuChanglong LiHang ZhuangJiali WangQingfeng WangJinhong ZhouXuehai ZhouPublished in: CCGrid (2017)
Keyphrases
- sequence alignment
- scalable distributed
- pairwise
- parallel algorithm
- massively parallel
- dynamic programming
- parallel processing
- file system
- processor array
- amino acids
- gpu accelerated
- single instruction multiple data
- protein structure prediction
- parallel implementation
- protein sequences
- multiple sequence alignment
- parallel architectures
- binding sites
- multiple alignment
- secondary structure