HAlign-II: efficient ultra-large multiple sequence alignment and phylogenetic tree reconstruction with distributed and parallel computing.
Shixiang WanQuan ZouPublished in: Algorithms Mol. Biol. (2017)
Keyphrases
- relational databases
- multiple sequence alignment
- phylogenetic trees
- parallel computing
- memory efficient
- database
- computational biology
- computing systems
- maximum parsimony
- protein sequences
- genetic algorithm
- secondary structure
- multiple sequence alignments
- distributed systems
- pairwise
- sequence alignment
- biological sequences
- shared memory
- data analysis
- natural language
- search algorithm
- data mining
- neural network