A probabilistic context-free grammar for the detection of binding sites from a protein sequence.
Witold DyrkaJean-Christophe NebelPublished in: BMC Syst. Biol. (2007)
Keyphrases
- protein sequences
- binding sites
- protein protein
- biological sequences
- sequence alignment
- genome sequences
- gene expression
- sequence data
- protein protein interactions
- protein structure
- motif discovery
- amino acids
- protein families
- dna sequences
- computational methods
- transcription factors
- secondary structure
- physico chemical
- protein folding
- protein function
- statistical significance
- computational biology
- protein structure prediction
- predicting protein
- natural language parsing
- molecular biology
- interaction networks
- pairwise
- dna binding