Regular Language Constrained Sequence Alignment Revisited.

Gregory Kucherov Tamar Pinhas Michal Ziv-Ukelson

Published in: J. Comput. Biol. (2011)

Keyphrases

sequence alignment
pairwise
dynamic programming
natural language
protein sequences
programming language
gpu accelerated
language learning
protein structure
comparative genomics
multiple alignment
multiple sequence alignment
amino acids
multi dimensional
binding sites
regular languages
real time
data sets