PanCGH: a genotype-calling algorithm for pangenome CGH data.
Jumamurat R. BayjanovMichiel WelsMarjo StarrenburgJohan E. T. van Hylckama VliegRoland J. SiezenDouwe MolenaarPublished in: Bioinform. (2009)
Keyphrases
- input data
- noisy data
- matching algorithm
- database
- data sets
- search space
- data analysis
- preprocessing
- synthetic data
- detection algorithm
- learning algorithm
- high quality
- data points
- data sources
- computational cost
- significant improvement
- dynamic programming
- probabilistic model
- original data
- data distribution
- worst case
- data collection
- expectation maximization
- computational complexity
- data structure
- single scan
- data quality
- information loss
- data reduction
- synthetic datasets
- numerical data
- high dimensional data
- optimization algorithm
- image data
- cost function
- k means
- optimal solution